The breast cancer-associated genes BRCA1 on chromosome 17q and BRCA2 on chromosome 13q are the most well-known breast cancer susceptibility genes. Not all families with multiple cases of breast and ovarian cancers have mutations in BRCA1 and BRCA 2. There are also other genes that have been linked with an increased risk of developing breast and other cancers. These genes are classified into high, moderate, and low penetrance genes. e.g. High Penetrance gene: BRCA1, BRCA2, PTEN, P53, STK11, CDH1,PALB2; Moderate Penetrance gene: ATM, CHEK2,, RAD50, RAD51C, RAD51D etc. Blood tests now include many of these genes including BRCA 1/2 in a single multiple-gene panel test
BRCA1 and BRCA2 mutations are inherited in an autosomal dominant fashion but act recessively on the cellular level as tumor suppressor genes involved in double-stranded DNA (dsDNA) break repair. Mutations in the BRCA1 and BRCA2 genes are responsible for ~60% (up to 85%) of HBOC.
The lifetime risk of breast cancer and lifetime risk of ovarian cancer in women are as follows:
About 5-10% of breast cancers and 15-20% of ovarian cancers can be attributed to HBOC. An estimated 1 in 500-1000 individuals in the general population have a disease-causing BRCA1/2 variant. However, the likelihood of HBOC is influenced by an individual’s race or ethnicity. About 1 in 40 individuals of Ashkenazi Jewish ancestry carry a BRCA1 or BRCA2 mutation.
The burden attributable to inherited mutations in Indian patients is not well characterized. In a study with 1010 unrelated patients and families from across India, mutations were detected in 30.1% of cases. A majority (84.9%) of the mutations were detected in the BRCA1/2 genes as compared to non-BRCA genes (15.1%). 75% of detection of hereditary variants was observed in patients whose age at diagnosis was below 40 years and who had a first-degree family member(s) affected by breast and/or ovarian cancers. Another study from India used a multi-gene panel test on 236 consecutive patients with breast cancer. P/LP mutations were found in 44/236 (18.64%) women; the most common mutations were in BRCA1 (46.8%) and BRCA2 (19.1%), with 34% of mutations present in non-BRCA genes. Thus, in the Indian population, there is a high prevalence of mutations in high-risk breast cancer genes.
The Cancer Genetic clinic is an important component of any comprehensive cancer center. It is a multidisciplinary team working just like any Multidisciplinary tumor board or Disease management group (DMG). The core anchor is the genetic counsellor and the other members working together. A trained physician or nurse may also perform the role of a genetic counsellor. Essential members include Genetic counsellors, Medical oncologists, Surgical oncologists, Radiation oncologists, Scientists or molecular geneticists, Psychiatrists, Social workers, Radiologists, and Pathologists. Patients attending the cancer clinics are referred on the suspicion of a hereditary condition from the clinics by any of the above clinicians. Patients or relatives may also walk in directly to the counsellor. After pre-test Counselling, a report is generated by the GC (genetic counsellor) about the necessity of the test and the recommended test. The pre-test Counselling step can also be performed by the clinician if he has adequate time and expertise. This is called MAINSTREAMING. The patient undergoes the testing after proper consent and the report comes to the counsellor and treating clinician after a turnaround time (TAT) of about 4 weeks. The report is discussed in a tumor board and the appropriate advice is given for personalized risk management and treatment of the patient. At the same time, at-risk relatives are identified and their risk management plan is developed. The final plan is communicated to the patient by the genetic counsellor about the necessity of the test and the recommended test.
The genetic tests identify germline mutations in the patient’s genetic material. The identification of mutations influences the patient’s treatment plan as well as the lives of their family members, particularly first-degree relatives. Patients with operable breast cancer and a germline BRCA (gBRCA) mutation, would be counselled and discussed thoroughly about the type of surgery (eg breast conservation versus bilateral mastectomy). A positive germline test will thus influence a number of therapeutic decisions that are immediately relevant to the patient’s management plan. Cascade testing will reveal unaffected carriers who have not yet manifested a tumour. The identified mutation will provide reliable estimates of her future cancer risk. Radiological surveillance and risk reduction surgeries performed at the appropriate time (e.g., risk reduction salpingo-oophorectomy, RRSO) are highly effective strategies for mitigating this risk. As a result, an almost unavoidable cancer can be completely avoided. This is known as the “Precision Prevention” potential.
When choosing patients for germline testing, most clinicians follow the NCCN guidelines. These guidelines are updated regularly to reflect the most recent research. The criteria have been significantly relaxed in the 2023 version, which now recommends germline testing for all patients with a personal history of breast cancer and any of the following: Triple negative breast cancer (TNBC) at any age, 1 or more close relatives with breast cancer/ovarian cancer/prostate cancer/pancreatic cancer.
It is essential to order germline testing as early in the treatment journey as possible, close to the diagnosis. All patients who were previously diagnosed with cancer, survived cancer, and are eligible for germline testing but have not yet been tested; should also be recommended for screening.
A multigene panel test using Next Generation Sequencing is the standard method for germline testing (NGS). Blood and saliva can both be used and the TAT (turnaround time is usually 4 weeks). There is no ideal panel, but the testing panel should include at least all of the high penetrance and moderate penetrance genes. The cascade testing for relatives is performed as a single-site mutation test.
Patients with breast cancer and BRCA mutations should be informed about their increased risk of a second primary cancer of as high as 2 to 5 percent per year, and for younger patients, bilateral mastectomy may reduce the risk of a second primary. Women with LFS (Li-Fraumeni syndrome) (p53 mutation) who develop breast cancer are generally recommended to undergo mastectomy (removal of the whole breast tissues), rather than lumpectomy (removal of the abnormal tissue from the breast).
Risk reduction contralateral prophylactic mastectomy (removal of one or both the breasts) is often offered to patients with or without a previous history of breast cancer who carry a germline genetic mutation of BRCA1/2, TP53, PTEN, CDH1, or STK11 conferring a high risk for breast cancer mutation. Women with breast cancer and a family history of breast or ovarian cancer and who undergo a CPM have a 96 percent reduction in risk of developing contralateral cancer. A survival benefit with CPM exists for patients with a deleterious BRCA1 or BRCA2 mutation, and possibly for those diagnosed at a young age (<50 years). Risk-reducing bilateral salpingo-oophorectomy (rrBSO) is also recommended for women who carry a germline genetic mutation of BRCA1/2, and have completed childbearing. This should be performed by age 35 (BRCA1) or 45 (BRCA2).